Marinka Zitnik

Fusing bits and DNA

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Home Probabilistic Numerics

Probabilistic Numerics

Article: Bioinformatics: Gene Network Inference by Fusing Diverse Distributions

Our paper on Gene network inference by fusing data from diverse distributions has been published in Bioinformatics. We will present it at ISMB 2015 in Dublin. In the paper we describe FuseNet, a Markov network formulation that infers networks from a...

Article: @Baylor College of Medicine, Department of Molecular and Human Genetics

Between December 2013 and August 2014 I am visiting the Department of Molecular and Human Genetics at Baylor College of Medicine, Houston, TX, USA. During my stay we will do research on computational methods for data fusion and their applications in...

Article: Numerical Analysis of Matrix Functions

I have spent some time recently studying matrix functions, both from theoretical and computational perspective. There is a nice book by Nick J. Higham on functions of matrices, which I highly recommend to interested reader and which provides a...

Article: Renaming: MF - Matrix Factorization Techniques for Data Mining

In this short post I would like to update you on some recent changes in the MF - Matrix Factorization Techniques for Data Mining Library. Recently, the library MF - Matrix Factorization Techniques for Data Mining has been moved and renamed. It is...

Article: Fractal Dimension Computation Support in MF Library

I have always been fascinated by the world of fractals and have been deeply enthusiastic exploring the maths behind them. This post is announcing the support of the fractal dimension computation in the MF - Matrix Factorization for Data Mining...

Article: GSoC: MF - Matrix Factorization Techniques for Data Mining Review

Google Summer of Code 2011 has finished. On 22th of August it was firm "pencils down" date and today, on 26th of August, has been final evaluation deadline. Therefore, it is time for a small review to be published here on my blog. I successfully...